CDS

Accession Number TCMCG007C16727
gbkey CDS
Protein Id XP_033145032.1
Location join(948625..949011,949110..949247,949320..949429,949514..949616,949687..949794,949873..949985,950069..950150,950232..950312,950417..950472,950546..950681,950765..951484)
Gene LOC103855628
GeneID 103855628
Organism Brassica rapa

Protein

Length 677aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033289141.1
Definition cytosolic endo-beta-N-acetylglucosaminidase 1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category P
Description Glycosyl hydrolase family 85
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01227        [VIEW IN KEGG]
EC 3.2.1.96        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00511        [VIEW IN KEGG]
map00511        [VIEW IN KEGG]
GOs GO:0000270        [VIEW IN EMBL-EBI]
GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0004563        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005615        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0006022        [VIEW IN EMBL-EBI]
GO:0006026        [VIEW IN EMBL-EBI]
GO:0006027        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006491        [VIEW IN EMBL-EBI]
GO:0006517        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009253        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015929        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016231        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030203        [VIEW IN EMBL-EBI]
GO:0033925        [VIEW IN EMBL-EBI]
GO:0035821        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044033        [VIEW IN EMBL-EBI]
GO:0044035        [VIEW IN EMBL-EBI]
GO:0044040        [VIEW IN EMBL-EBI]
GO:0044041        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044278        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044421        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051672        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901136        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCATATCCAAAGACGAAACTATGCTAGCTCCACTTCCACCTTTCGATCCCACTAAGCCATCCACACCAATCTCATTTCCTATCAAAACTCTCCAAGACTTGGCGTCTCGGTCTTACTTCGACTCCTTTCACTTCCCCTTTAACCGCTCCTCAGTCTCTCTCCGACAGAACATCGGTTCCTTGCCTGACCGATCCAGGCTTCTTGTTTGTCACGACATGAAAGGAGGGTACGTTGACGACAAGTGGGTACAAGGGTGTGGAAACAACAAAGGTTTCGCGATCTGGAACTGGTACTTGATGGACGTTTTTGTCTACTTTGCTCACTCTCTCGTCACTCTCCCTCCTCCTTGCTGGACCAACACTGCTCACAGACACGGCGTCAAGGTACTGGGGACTTTCATCACTGAATGGGACGAAGGGAAAGCTACTTGCAAGGAGTTGTTGGCGACCAAGGAGTCTGCGCAGATGTATGCAGAGCGCTTAGCAGAACTTGCTGCTGCTCTAGGCTTTGATGGGTGGCTGATTAATATAGAGAATGTAATAGATAAAGTCCAGATTCCAAATTTGAAGACTTTTGTTAGTCATCTTACAAAAGTCATGCATTCATCTGTACCCGGGAGTTTAGTTATATGTGTCACTGTTGAGGGCAGACTTGCTTGGCAAGACCAGTTGAATGAAATGAACAAGCCTTTCTTTGATATATGTGATGGAATATTCATGAACTATACATGGAAGGAGAACTACCCAAAAGCATCAGCTAAGATTGCTGGTGAGAGAAAACATGATGTCTACATGGGAATAGATGTGTTTGGTAGGGGCACTTTCGGTGGTGGCCAGTGGAAGGCAAATGTTGCACTTGATTTGCTGAAGAGCAGCGATGTATCAGCTGCTCTATTTGCTCCTGGATGGGTGTATGAGACCAATCAACCACCAGATTATCATACCGCACAAAACAAATGGTGGTCACTTGTTGAGAAGTCATGGGGAATAGTTCAAACATATCCACAATCTTTACCCTTCTACTCAGATTTTAATCAGGGACTTGGTTCTCATGTTTCTCTCCAAGGTCAGAAACTATCAGATGCTCCCTGGTACAACATTTCTTGCCAAAGTCTGCAGCCACTCTTAGAATTCAATGAAGGAAACAAGTCAGAGGCCATGCAGGTCATGGTTGATGGTAGAGAAGCATCATATAACGGAGGAGGGAACATTAGTTTCAAAGGAACACTAAAGAGAAATGCACATTACACAACAAGACTATTCAAACCTAACCTAAAGCTTTCTGGTTCTCACATCTCTGTCTCCTACTCTGTGAAATCAGATGAAAGATCTATGCTAGGCCTTCTCCTCCGTTTTTCAACTCCTTCACAGGAGACAAAGTCCTTAATCATGGCTCCAAATGAATACATGCACAGATTTGGTGACATGTTCCTGCCATGCCTAAGAAGGACCACATCGGACTGGACAGTGCACGAAACAAACCTTCTTATGGATGGACACACACTGACTGAGATCTCTGCCTTGTGCTACGGTCCAGATGATCTTGCAGAAGAAACAAACACACAAGGATACTCTGCTTTGCTTGGCCATATCTCTATCAAGTCCCAGCAGAAAACCAAACCTTTCCCCCCAGCTTCAGCATGGGTTGTCGAGGCTCATAACATAGAGATTGTACCGGGTGATTCCGGCTCCAGGACTTTGAATTGTAAGCTGCAATGGAGGTTGAAGCATCCTGAGGAGGATTCTGTGTTTACAAGGTACAATGTGTATGCGGAGAAGCTGAATTCAAGTGATGACAAGTCAAGGAAGGTAATGGAAGAACCAAGAAGCGAGAAAGTGTTTCTTGGAACGGCTCATGTTGATGCTTATTATATTTCTGATATGGTGGTTGGACCCGATGTGAAGAAAGTCAAGTTTGTGATTCAGACCTGTGGTGAAGATGGTTCATGGCAGGAGCTGGATGCTTCCCCAAACATTCTGGTTGAGGCAGAGCGTCTCAGTTCAAAGCTTTGTTGCTGTGGGTTGATTTGA
Protein:  
MSISKDETMLAPLPPFDPTKPSTPISFPIKTLQDLASRSYFDSFHFPFNRSSVSLRQNIGSLPDRSRLLVCHDMKGGYVDDKWVQGCGNNKGFAIWNWYLMDVFVYFAHSLVTLPPPCWTNTAHRHGVKVLGTFITEWDEGKATCKELLATKESAQMYAERLAELAAALGFDGWLINIENVIDKVQIPNLKTFVSHLTKVMHSSVPGSLVICVTVEGRLAWQDQLNEMNKPFFDICDGIFMNYTWKENYPKASAKIAGERKHDVYMGIDVFGRGTFGGGQWKANVALDLLKSSDVSAALFAPGWVYETNQPPDYHTAQNKWWSLVEKSWGIVQTYPQSLPFYSDFNQGLGSHVSLQGQKLSDAPWYNISCQSLQPLLEFNEGNKSEAMQVMVDGREASYNGGGNISFKGTLKRNAHYTTRLFKPNLKLSGSHISVSYSVKSDERSMLGLLLRFSTPSQETKSLIMAPNEYMHRFGDMFLPCLRRTTSDWTVHETNLLMDGHTLTEISALCYGPDDLAEETNTQGYSALLGHISIKSQQKTKPFPPASAWVVEAHNIEIVPGDSGSRTLNCKLQWRLKHPEEDSVFTRYNVYAEKLNSSDDKSRKVMEEPRSEKVFLGTAHVDAYYISDMVVGPDVKKVKFVIQTCGEDGSWQELDASPNILVEAERLSSKLCCCGLI